Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00816 | Avbf_01788 | A0A444TMW7 | A0A444THR9 | Conserved oligomeric Golgi complex subunit 7. | Golgin subfamily A member 5. | 0.625 |
Avbf_00816 | Avbf_02189 | A0A444TMW7 | A0A444TJS6 | Conserved oligomeric Golgi complex subunit 7. | Thyroid receptor-interacting protein 11. | 0.415 |
Avbf_00816 | Avbf_03028 | A0A444TMW7 | A0A444TPQ6 | Conserved oligomeric Golgi complex subunit 7. | Syntaxin-5. | 0.848 |
Avbf_00816 | Avbf_05314 | A0A444TMW7 | A0A444T0U5 | Conserved oligomeric Golgi complex subunit 7. | Golgi SNAP receptor complex member 1. | 0.810 |
Avbf_00816 | Avbf_07169 | A0A444TMW7 | A0A444SF12 | Conserved oligomeric Golgi complex subunit 7. | Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. | 0.995 |
Avbf_00816 | Avbf_08991 | A0A444TMW7 | A0A444STX0 | Conserved oligomeric Golgi complex subunit 7. | Conserved oligomeric Golgi complex subunit 3. | 0.996 |
Avbf_00816 | Avbf_11039 | A0A444TMW7 | A0A444T947 | Conserved oligomeric Golgi complex subunit 7. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.997 |
Avbf_00816 | Avbf_11262 | A0A444TMW7 | A0A444SRT4 | Conserved oligomeric Golgi complex subunit 7. | GTP-binding protein YPTC1. | 0.901 |
Avbf_01788 | Avbf_00816 | A0A444THR9 | A0A444TMW7 | Golgin subfamily A member 5. | Conserved oligomeric Golgi complex subunit 7. | 0.625 |
Avbf_01788 | Avbf_02189 | A0A444THR9 | A0A444TJS6 | Golgin subfamily A member 5. | Thyroid receptor-interacting protein 11. | 0.586 |
Avbf_01788 | Avbf_03028 | A0A444THR9 | A0A444TPQ6 | Golgin subfamily A member 5. | Syntaxin-5. | 0.534 |
Avbf_01788 | Avbf_05314 | A0A444THR9 | A0A444T0U5 | Golgin subfamily A member 5. | Golgi SNAP receptor complex member 1. | 0.578 |
Avbf_01788 | Avbf_07169 | A0A444THR9 | A0A444SF12 | Golgin subfamily A member 5. | Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. | 0.557 |
Avbf_01788 | Avbf_08991 | A0A444THR9 | A0A444STX0 | Golgin subfamily A member 5. | Conserved oligomeric Golgi complex subunit 3. | 0.638 |
Avbf_01788 | Avbf_11039 | A0A444THR9 | A0A444T947 | Golgin subfamily A member 5. | Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. | 0.638 |
Avbf_01788 | Avbf_11262 | A0A444THR9 | A0A444SRT4 | Golgin subfamily A member 5. | GTP-binding protein YPTC1. | 0.789 |
Avbf_01788 | Avbf_11545 | A0A444THR9 | A0A444SGW0 | Golgin subfamily A member 5. | Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. | 0.891 |
Avbf_01788 | Avbf_16590 | A0A444THR9 | A0A444SDS6 | Golgin subfamily A member 5. | Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. | 0.891 |
Avbf_02189 | Avbf_00816 | A0A444TJS6 | A0A444TMW7 | Thyroid receptor-interacting protein 11. | Conserved oligomeric Golgi complex subunit 7. | 0.415 |
Avbf_02189 | Avbf_01788 | A0A444TJS6 | A0A444THR9 | Thyroid receptor-interacting protein 11. | Golgin subfamily A member 5. | 0.586 |
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