STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07786SUMO-activating enzyme subunit 2. (114 aa)    
Predicted Functional Partners:
Avbf_09182
SUMO-conjugating enzyme UBC9-B; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.988
Avbf_07961
SUMO-activating enzyme subunit 1.
   
 0.987
Avbf_12358
SUMO-activating enzyme subunit 1.
   
 0.987
Avbf_02212
Small ubiquitin-related modifier.
   
 0.982
Avbf_03871
Small ubiquitin-related modifier.
   
 0.982
Avbf_04706
Ubiquitin-like-conjugating enzyme ATG3.
    
 0.956
Avbf_04060
Molybdopterin synthase catalytic subunit 2.
  
 0.950
Avbf_08331
NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.949
Avbf_05669
NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.949
Avbf_14494
Microtubule-associated proteins 1A/1B light chain 3A.
   
 0.940
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.