STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02144Pre-mRNA-processing factor 19. (419 aa)    
Predicted Functional Partners:
Avbf_14413
Pre-mRNA-splicing factor SYF1.
   
 0.989
Avbf_00929
Cell division cycle 5-like protein.
   
 0.989
Avbf_01541
Pleiotropic regulator 1.
   
0.989
Avbf_12766
Intron-binding protein aquarius.
    
 0.987
Avbf_15811
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
    
 0.985
Avbf_03876
Pre-mRNA-splicing factor ISY1-like protein.
    
 0.984
Avbf_03545
Splicing factor 3B subunit 3.
   
 
 0.981
Avbf_00198
U5 small nuclear ribonucleoprotein component.
   
 
 0.981
Avbf_11253
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.979
Avbf_08199
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.979
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.