STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_01028DIOX_N domain-containing protein. (141 aa)    
Predicted Functional Partners:
Avbf_09726
Acyl-CoA synthetase family member 4.
     
 0.804
Avbf_07181
Serine/threonine-protein kinase ULK2.
    
 
 0.800
Avbf_07064
Serine/threonine-protein kinase unc-51.
    
 
 0.800
Avbf_05677
Serine/threonine-protein kinase ULK3.
    
 
 0.800
Avbf_12307
Mycosubtilin synthase subunit C.
     
 0.792
Avbf_01887
Uncharacterized protein.
     
 0.792
Avbf_01580
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.723
Avbf_06409
40S ribosomal protein S17.
  
 0.661
Avbf_00452
40S ribosomal protein S17.
  
 0.661
Avbf_06777
Ras-related protein Rab-9A.
    
 0.595
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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