STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10085Uncharacterized protein. (1028 aa)    
Predicted Functional Partners:
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.942
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.942
Avbf_10060
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
    
 
 0.918
Avbf_01971
Tonsoku-like protein.
    
 0.905
Avbf_15939
Optineurin.
    
 0.884
Avbf_02321
Laminin subunit beta-1 variant.
    
 0.884
Avbf_03789
Uncharacterized protein.
    
 
 0.868
Avbf_08532
Serine/threonine-protein kinase PLK4.
    
 0.866
Avbf_09194
Separin.
    
 0.863
Avbf_17373
Iron-sulfur cluster assembly enzyme ISCU, mitochondrial.
    
 0.860
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.