STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_05468Uncharacterized protein. (560 aa)    
Predicted Functional Partners:
Avbf_03028
Syntaxin-5.
   
 0.983
Avbf_05314
Golgi SNAP receptor complex member 1.
    
 0.979
Avbf_04681
Golgi reassembly-stacking protein 2.
    
 0.958
Avbf_07867
Uncharacterized protein.
    
 0.957
Avbf_11262
GTP-binding protein YPTC1.
    
 0.940
Avbf_05803
Ras-related protein Rab-33B.
    
 0.883
Avbf_05802
Ras-related protein Rab-33.
    
 0.883
Avbf_12628
Uncharacterized protein.
   
 
 0.838
Avbf_08525
Src substrate protein p85.
   
 
 0.838
Avbf_00835
Uncharacterized protein.
   
 
 0.838
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.