STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_01861ATP-dependent helicase brm. (1145 aa)    
Predicted Functional Partners:
Avbf_04739
Trithorax group protein osa.
   
 0.991
Avbf_05893
SWI/SNF complex subunit SMARCC2.
   
 0.990
Avbf_03684
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
   
 0.990
Avbf_03892
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
 0.986
Avbf_10390
Actin-like protein 6A; Belongs to the actin family.
    
 0.984
Avbf_02100
PHD finger protein 10.
   
 0.980
Avbf_11310
Bromodomain-containing protein 7.
    
 0.974
Avbf_03217
Chromatin-remodeling complex ATPase chain Iswi.
 
 
 
 0.972
Avbf_12168
Histone H2A deubiquitinase MYSM1.
   
 0.971
Avbf_02204
Protein polybromo-1.
   
 0.961
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.