STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_01998Sorting nexin-12. (163 aa)    
Predicted Functional Partners:
Avbf_12887
Uncharacterized protein.
   
 0.996
Avbf_09784
Vacuolar protein sorting-associated protein 26B-like.
    
 0.994
Avbf_16599
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.956
Avbf_03154
Ribosomal protein S6 kinase delta-1.
     
 0.932
Avbf_00755
Protein wntless.
    
 0.921
Avbf_02844
Ubiquitin carboxyl-terminal hydrolase 10; Belongs to the peptidase C19 family.
    
 0.807
Avbf_01525
Sorting nexin-13.
     
 0.718
Avbf_10242
Sorting nexin-25.
     
 0.712
Avbf_11153
Abscission/NoCut checkpoint regulator.
    
 
 0.647
Avbf_07861
Sorting nexin-21.
     
 0.640
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.