STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_03461Methylcytosine dioxygenase TET3. (1211 aa)    
Predicted Functional Partners:
Avbf_05897
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase subunit.
   
 
 0.889
Avbf_03668
Segment polarity protein dishevelled-like protein DVL-3.
    
 0.846
Avbf_12168
Histone H2A deubiquitinase MYSM1.
   
 
 0.703
Avbf_07534
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
     
 0.622
Avbf_06254
Purine nucleoside phosphorylase.
     
 0.587
Avbf_01217
Purine nucleoside phosphorylase.
     
 0.587
Avbf_09596
AT-rich interactive domain-containing protein 4B.
   
 
 0.531
Avbf_14553
AT-rich interactive domain-containing protein 5B.
   
 
 0.531
Avbf_00490
AT-rich interactive domain-containing protein 5B.
   
 
 0.531
Avbf_05751
Harmonin.
      
 0.526
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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