STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07616RAB6A-GEF complex partner protein 1. (1521 aa)    
Predicted Functional Partners:
Avbf_13297
RAB6A-GEF complex partner protein 2.
    
 0.994
Avbf_01078
Ras-related protein Rab6.
    
 0.988
Avbf_05917
Uncharacterized protein.
    
 0.971
Avbf_07169
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.959
Avbf_19031
Conserved oligomeric Golgi complex subunit 8.
   
 0.949
Avbf_11039
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.923
Avbf_01093
ADP-ribosylation factor-like protein 1.
    
  0.920
Avbf_03192
ADP-ribosylation factor-related protein 1.
    
 0.862
Avbf_05803
Ras-related protein Rab-33B.
    
 0.840
Avbf_05802
Ras-related protein Rab-33.
    
 0.840
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.