STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10898Protein argonaute-3. (489 aa)    
Predicted Functional Partners:
Avbf_03496
Protein Gawky.
    
 0.962
Avbf_10006
Interferon-inducible double-stranded RNA-dependent protein kinase activator A-like protein A.
    
 0.953
Avbf_10236
Endoribonuclease Dcr-1.
   
 0.953
Avbf_04913
Endoribonuclease Dicer.
   
 0.950
Avbf_08224
Ribonuclease 3.
    
 0.947
Avbf_17971
PAZ domain-containing protein.
 
     0.941
Avbf_05425
Double-stranded RNA-binding protein Staufen-like protein 2.
    
 0.940
Avbf_02322
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.921
Avbf_01573
SID1 transmembrane family member 1.
    
 0.920
Avbf_06294
Uncharacterized protein.
   
 0.919
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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