STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_03221Afadin. (1022 aa)    
Predicted Functional Partners:
Avbf_12552
Tight junction protein ZO-1.
   
 0.982
Avbf_06202
Catenin alpha.
    
 0.955
Avbf_07253
Cold shock domain-containing protein E1.
    
 0.944
Avbf_07252
Cold shock domain-containing protein E1.
    
 0.944
Avbf_08056
Ras-related protein Ral-a.
    
 0.944
Avbf_00683
Ras-like protein.
    
 0.944
Avbf_03230
Ras-related protein Rab-8A.
    
 0.943
Avbf_03228
Ras-related protein Rab-10.
    
 0.943
Avbf_03229
Ras-related protein Rap-1b.
    
 0.943
Avbf_16511
GTP-binding protein Rit1.
    
 0.929
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.