STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07896Glutathione S-transferase GstB; Belongs to the GST superfamily. (105 aa)    
Predicted Functional Partners:
Avbf_12753
Putative proline--tRNA ligase.
  
 0.983
Avbf_12754
Bifunctional glutamate/proline--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.983
Avbf_11061
Elongation factor 1-delta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.936
Avbf_07649
Elongation factor 1-beta.
   
 0.936
Avbf_14182
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.936
Avbf_04691
DNA-directed RNA polymerase II subunit RPB3.
   
 
 0.935
Avbf_10272
Elongation factor 1-gamma.
   
 0.911
Avbf_01098
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.907
Avbf_08834
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.907
Avbf_08803
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.906
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.