Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_02490 | Avbf_13897 | A0A444T4F0 | A0A444TMY5 | Arginine-glutamic acid dipeptide repeats protein. | Cadherin-related tumor suppressor. | 0.633 |
Avbf_03115 | Avbf_13897 | A0A444TP72 | A0A444TMY5 | Extracellular serine/threonine protein kinase four-jointed. | Cadherin-related tumor suppressor. | 0.811 |
Avbf_04938 | Avbf_06151 | A0A444SNC3 | A0A444TRH1 | LIX1-like protein. | JmjC domain-containing protein. | 0.579 |
Avbf_04938 | Avbf_06748 | A0A444SNC3 | A0A444T266 | LIX1-like protein. | Uncharacterized protein. | 0.579 |
Avbf_04938 | Avbf_08511 | A0A444SNC3 | A0A444TAU0 | LIX1-like protein. | Serine/threonine-protein kinase VRK1. | 0.579 |
Avbf_04938 | Avbf_10949 | A0A444SNC3 | A0A444TS52 | LIX1-like protein. | Uncharacterized protein. | 0.579 |
Avbf_04938 | Avbf_13897 | A0A444SNC3 | A0A444TMY5 | LIX1-like protein. | Cadherin-related tumor suppressor. | 0.735 |
Avbf_04938 | Avbf_15477 | A0A444SNC3 | A0A444T202 | LIX1-like protein. | Casein kinase I isoform epsilon. | 0.751 |
Avbf_06151 | Avbf_04938 | A0A444TRH1 | A0A444SNC3 | JmjC domain-containing protein. | LIX1-like protein. | 0.579 |
Avbf_06151 | Avbf_13897 | A0A444TRH1 | A0A444TMY5 | JmjC domain-containing protein. | Cadherin-related tumor suppressor. | 0.577 |
Avbf_06748 | Avbf_04938 | A0A444T266 | A0A444SNC3 | Uncharacterized protein. | LIX1-like protein. | 0.579 |
Avbf_06748 | Avbf_13897 | A0A444T266 | A0A444TMY5 | Uncharacterized protein. | Cadherin-related tumor suppressor. | 0.577 |
Avbf_08140 | Avbf_13897 | A0A444TN51 | A0A444TMY5 | Gamma-secretase subunit Aph-1. | Cadherin-related tumor suppressor. | 0.552 |
Avbf_08511 | Avbf_04938 | A0A444TAU0 | A0A444SNC3 | Serine/threonine-protein kinase VRK1. | LIX1-like protein. | 0.579 |
Avbf_08511 | Avbf_13897 | A0A444TAU0 | A0A444TMY5 | Serine/threonine-protein kinase VRK1. | Cadherin-related tumor suppressor. | 0.577 |
Avbf_10949 | Avbf_04938 | A0A444TS52 | A0A444SNC3 | Uncharacterized protein. | LIX1-like protein. | 0.579 |
Avbf_10949 | Avbf_13897 | A0A444TS52 | A0A444TMY5 | Uncharacterized protein. | Cadherin-related tumor suppressor. | 0.577 |
Avbf_11520 | Avbf_13897 | A0A444SXT9 | A0A444TMY5 | Uncharacterized protein. | Cadherin-related tumor suppressor. | 0.633 |
Avbf_13897 | Avbf_02490 | A0A444TMY5 | A0A444T4F0 | Cadherin-related tumor suppressor. | Arginine-glutamic acid dipeptide repeats protein. | 0.633 |
Avbf_13897 | Avbf_03115 | A0A444TMY5 | A0A444TP72 | Cadherin-related tumor suppressor. | Extracellular serine/threonine protein kinase four-jointed. | 0.811 |
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