STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_00422Exosome complex exonuclease RRP42. (267 aa)    
Predicted Functional Partners:
Avbf_11237
Exosome complex component CSL4.
   
 0.999
Avbf_07361
Exosome complex component RRP4.
   
 0.999
Avbf_17507
Exosome complex component RRP46.
  
 0.999
Avbf_05260
Exosome complex component RRP43.
  
0.998
Avbf_10235
Nuclear nucleic acid-binding protein C1D.
   
 0.994
Avbf_04889
Exosome complex component RRP40.
  
 0.992
Avbf_01782
Exosome complex component RRP40.
  
 0.992
Avbf_04082
Exosome complex exonuclease RRP44.
   
 0.991
Avbf_09005
Helicase SKI2W.
   
 0.991
Avbf_04424
DIS3-like exonuclease 2; Belongs to the RNR ribonuclease family.
   
 0.990
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.