STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_09301Myotubularin-related protein 10-B. (765 aa)    
Predicted Functional Partners:
Avbf_12312
Myotubularin-related protein 2.
  
0.857
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.826
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.826
Avbf_01440
Helicase domino.
   
 
 0.823
Avbf_13333
Putative assembly chaperone of rpl4.
    
  0.804
Avbf_08116
Protein dpy-30-like protein.
    
   0.804
Avbf_07119
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.804
Avbf_03908
Enolase.
    
  0.804
Avbf_06987
GTP:AMP phosphotransferase, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.
    
   0.793
Avbf_03791
Adenylate kinase; Belongs to the adenylate kinase family.
    
   0.793
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.