STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10824Ubiquitin domain-containing protein UBFD1. (173 aa)    
Predicted Functional Partners:
Avbf_06353
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.994
Avbf_13144
26S proteasome non-ATPase regulatory subunit 12.
   
 0.993
Avbf_10917
26S proteasome non-ATPase regulatory subunit 7.
   
 0.993
Avbf_08146
26S proteasome non-ATPase regulatory subunit 4.
   
 0.993
Avbf_08472
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
 0.993
Avbf_00314
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.993
Avbf_09529
26S proteasome non-ATPase regulatory subunit 3.
   
 0.989
Avbf_08716
26S protease regulatory subunit 4.
   
 0.989
Avbf_04754
26S proteasome non-ATPase regulatory subunit 11.
   
 0.988
Avbf_01379
26S proteasome non-ATPase regulatory subunit 13.
   
 0.988
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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