STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_07631Retinoic acid receptor RXR. (434 aa)    
Predicted Functional Partners:
Avbf_01564
Nuclear receptor coactivator 2.
   
 0.997
Avbf_06862
Nuclear hormone receptor HR96.
   
 0.987
Avbf_05433
Vitamin D3 receptor.
   
0.987
Avbf_15306
Putative nuclear hormone receptor HR38.
    
0.977
Avbf_04607
CREB-binding protein.
    
 0.941
Avbf_04577
CREB-binding protein.
    
 0.941
Avbf_11568
Neuronal PAS domain-containing protein 2.
    
 0.936
Avbf_01008
Aryl hydrocarbon receptor nuclear translocator-like protein.
   
 0.928
Avbf_06450
Aryl hydrocarbon receptor nuclear translocator-like protein 1.
    
 0.928
Avbf_07859
Pre-mRNA-splicing factor RBM22.
   
 0.909
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.