STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_03794Hemolymph clottable protein. (447 aa)    
Predicted Functional Partners:
Avbf_03255
Uncharacterized protein.
   
 0.906
Avbf_12934
Very low-density lipoprotein receptor.
    
 0.735
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.674
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.674
Avbf_08714
Protein NPC2-like protein.
     
 0.650
Avbf_05898
Endoplasmin.
    
 0.637
Avbf_12006
Protein eyes shut.
    
 0.637
Avbf_00087
Calreticulin.
    
 0.632
Avbf_05366
Tyrosine-protein phosphatase non-receptor type 11.
    
 0.632
Avbf_14912
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
     
 0.618
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.