STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_03873Ribonuclease H. (232 aa)    
Predicted Functional Partners:
Avbf_09221
Ribonuclease H2 subunit A.
  
 
 0.959
Avbf_15600
Uncharacterized protein.
   
 
 0.931
Avbf_15915
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.886
Avbf_09068
Uncharacterized protein.
  
 
 0.838
Avbf_01607
Nucleoside diphosphate kinase.
    
 0.836
Avbf_12485
Phosphoglycerate kinase.
    
 0.825
Avbf_03591
Nucleoside diphosphate-linked moiety X motif 13.
    
  0.813
Avbf_08471
NAD kinase.
    
  0.811
Avbf_08901
Peptidyl-tRNA hydrolase ICT1, mitochondrial.
  
 
 0.805
Avbf_03180
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.802
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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