STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_01654Transcription elongation factor B polypeptide 3. (667 aa)    
Predicted Functional Partners:
Avbf_01532
RNA polymerase-associated protein LEO1.
    
 0.995
Avbf_16899
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.976
Avbf_09710
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.976
Avbf_01940
Transcription elongation factor B polypeptide 2.
    
 0.974
Avbf_00710
60S ribosomal protein L18.
   
   0.939
Avbf_05742
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
 
 0.938
Avbf_05430
60S ribosomal protein L9.
   
 
 0.935
Avbf_05756
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
   0.934
Avbf_11926
Transmembrane protein 45B.
    
   0.934
Avbf_08642
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
 
 0.934
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.