STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_10623Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (384 aa)    
Predicted Functional Partners:
Avbf_00963
Cyclin-T1.
   
 0.988
Avbf_02322
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.986
Avbf_02989
Cyclin-K; Belongs to the cyclin family.
   
 0.970
Avbf_00041
AF4/FMR2 family member 4.
    
 0.965
Avbf_00042
Uncharacterized protein.
    
 0.965
Avbf_06970
Protein AF-9.
    
 0.964
Avbf_03017
Transcription elongation factor SPT5.
    
 0.961
Avbf_05839
RNA polymerase II elongation factor Ell.
    
 0.961
Avbf_16728
Cyclin-related protein FAM58A; Belongs to the cyclin family.
   
 0.959
Avbf_16724
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.959
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (24%) [HD]