STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_02377RNA-binding protein 45. (545 aa)    
Predicted Functional Partners:
Avbf_02569
Glucose-6-phosphate 1-dehydrogenase.
  
 0.960
Avbf_02573
G6PD_C domain-containing protein.
  
 0.960
Avbf_02516
Transaldolase.
  
 0.955
Avbf_08259
Transketolase.
  
 
 0.944
Avbf_16536
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 0.911
Avbf_02406
Ribose-5-phosphate isomerase.
   
 
 0.886
Avbf_19126
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.870
Avbf_08230
6-phosphogluconolactonase.
  
 
 0.870
Avbf_01316
Glucosamine-6-phosphate isomerase.
  
 
 0.857
Avbf_12485
Phosphoglycerate kinase.
   
 
 0.815
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.