Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_01042 | Avbf_01823 | A0A444TF48 | A0A444TMF9 | Brix domain-containing protein. | Periodic tryptophan protein 2-like protein. | 0.999 |
Avbf_01042 | Avbf_02023 | A0A444TF48 | A0A444TN97 | Brix domain-containing protein. | Pre-rRNA-processing protein TSR1-like protein. | 0.954 |
Avbf_01042 | Avbf_03533 | A0A444TF48 | A0A444TVT0 | Brix domain-containing protein. | Putative ATP-dependent RNA helicase DHX34. | 0.956 |
Avbf_01042 | Avbf_04859 | A0A444TF48 | A0A444TG99 | Brix domain-containing protein. | Bystin. | 0.991 |
Avbf_01042 | Avbf_04861 | A0A444TF48 | A0A444TGA0 | Brix domain-containing protein. | Uncharacterized protein. | 0.991 |
Avbf_01042 | Avbf_09770 | A0A444TF48 | A0A444TS96 | Brix domain-containing protein. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.972 |
Avbf_01042 | Avbf_15669 | A0A444TF48 | A0A444T5J0 | Brix domain-containing protein. | Nucleolar protein 6. | 0.998 |
Avbf_01823 | Avbf_01042 | A0A444TMF9 | A0A444TF48 | Periodic tryptophan protein 2-like protein. | Brix domain-containing protein. | 0.999 |
Avbf_01823 | Avbf_02023 | A0A444TMF9 | A0A444TN97 | Periodic tryptophan protein 2-like protein. | Pre-rRNA-processing protein TSR1-like protein. | 0.976 |
Avbf_01823 | Avbf_03533 | A0A444TMF9 | A0A444TVT0 | Periodic tryptophan protein 2-like protein. | Putative ATP-dependent RNA helicase DHX34. | 0.935 |
Avbf_01823 | Avbf_04859 | A0A444TMF9 | A0A444TG99 | Periodic tryptophan protein 2-like protein. | Bystin. | 0.994 |
Avbf_01823 | Avbf_04861 | A0A444TMF9 | A0A444TGA0 | Periodic tryptophan protein 2-like protein. | Uncharacterized protein. | 0.994 |
Avbf_01823 | Avbf_09677 | A0A444TMF9 | A0A444TNM7 | Periodic tryptophan protein 2-like protein. | DNA-directed RNA polymerase, mitochondrial. | 0.659 |
Avbf_01823 | Avbf_09770 | A0A444TMF9 | A0A444TS96 | Periodic tryptophan protein 2-like protein. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.979 |
Avbf_01823 | Avbf_11436 | A0A444TMF9 | A0A444STZ8 | Periodic tryptophan protein 2-like protein. | Uncharacterized protein. | 0.659 |
Avbf_01823 | Avbf_13066 | A0A444TMF9 | A0A444T0G5 | Periodic tryptophan protein 2-like protein. | DNA-directed RNA polymerase, mitochondrial. | 0.659 |
Avbf_01823 | Avbf_15669 | A0A444TMF9 | A0A444T5J0 | Periodic tryptophan protein 2-like protein. | Nucleolar protein 6. | 0.999 |
Avbf_02023 | Avbf_01042 | A0A444TN97 | A0A444TF48 | Pre-rRNA-processing protein TSR1-like protein. | Brix domain-containing protein. | 0.954 |
Avbf_02023 | Avbf_01823 | A0A444TN97 | A0A444TMF9 | Pre-rRNA-processing protein TSR1-like protein. | Periodic tryptophan protein 2-like protein. | 0.976 |
Avbf_02023 | Avbf_03533 | A0A444TN97 | A0A444TVT0 | Pre-rRNA-processing protein TSR1-like protein. | Putative ATP-dependent RNA helicase DHX34. | 0.979 |
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