STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_01256ATP-dependent RNA helicase DHX36. (119 aa)    
Predicted Functional Partners:
Avbf_05315
U3 small nucleolar RNA-associated protein 18-like protein.
   
 0.957
Avbf_04928
Intersectin-2.
    
  0.955
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.953
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.953
Avbf_03478
U3 small nucleolar RNA-associated protein 14-like protein C.
   
 0.953
Avbf_13921
AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.947
Avbf_06543
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.947
Avbf_12072
Protein RRP5-like protein.
  
 0.946
Avbf_01305
WD repeat-containing protein 46.
   
 0.942
Avbf_14054
Uncharacterized protein.
   
 0.940
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.