STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_00673Collagen alpha-1(IV) chain. (1672 aa)    
Predicted Functional Partners:
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.921
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.921
Avbf_00045
Myosin light chain kinase, smooth muscle.
    
 0.880
Avbf_02557
Myosin light chain kinase, smooth muscle.
    
 0.880
Avbf_01845
CAVP-target protein.
    
 0.866
Avbf_13437
Tubulin beta-3 chain.
    
 0.838
Avbf_12151
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
 0.838
Avbf_00790
Microtubule-associated protein RP/EB family member 1.
    
 
 0.832
Avbf_09848
Uncharacterized protein.
    
 0.816
Avbf_12585
Calcitonin gene-related peptide type 1 receptor.
    
 0.816
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.