STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_01584DUF659 domain-containing protein. (214 aa)    
Predicted Functional Partners:
Avbf_09160
Chromatin modification-related protein MEAF6.
    
 0.931
Avbf_07500
Chromatin modification-related protein MEAF6.
    
 0.931
Avbf_06765
Bromodomain-containing protein 1.
    
 0.928
Avbf_08320
TAF6-like RNA polymerase II factor-associated factor 65 kDa subunit 6L.
    
 0.883
Avbf_05198
Transcription initiation factor TFIID subunit 6.
    
 0.883
Avbf_08492
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.880
Avbf_06281
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.880
Avbf_06556
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.880
Avbf_06555
Uncharacterized protein.
    
 0.880
Avbf_02263
Histone acetyltransferase KAT6A.
    
 0.880
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.