STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_04615CD2 antigen cytoplasmic tail-binding protein 2-like protein. (364 aa)    
Predicted Functional Partners:
Avbf_02924
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.989
Avbf_03601
Putative U5 small nuclear ribonucleoprotein helicase.
   
 
 0.987
Avbf_03155
Putative ATP-dependent RNA helicase DDX23; Belongs to the DEAD box helicase family.
   
 
 0.972
Avbf_04580
Pre-mRNA-processing factor 6.
   
 
 0.967
Avbf_00198
U5 small nuclear ribonucleoprotein component.
    
 
 0.966
Avbf_09240
Small nuclear ribonucleoprotein-associated protein B.
    
 
 0.963
Avbf_13016
MPN domain-containing protein.
    
 
 0.953
Avbf_13015
Pre-mRNA-processing-splicing factor 8.
    
 
 0.953
Avbf_02439
N-alpha-acetyltransferase 38, NatC auxiliary subunit.
    
 
 0.951
Avbf_05405
U5 small nuclear ribonucleoprotein 40 kDa protein.
    
 
 0.924
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.