Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Avbf_00493 | Avbf_01795 | A0A444TET2 | A0A444TGE1 | WD repeat-containing protein 34. | WD repeat-containing protein 60. | 0.994 |
Avbf_00493 | Avbf_03172 | A0A444TET2 | A0A444TNC8 | WD repeat-containing protein 34. | Tctex1 domain-containing protein 2. | 0.968 |
Avbf_00493 | Avbf_03438 | A0A444TET2 | A0A444TUJ2 | WD repeat-containing protein 34. | Dynein light chain Tctex-type 1. | 0.978 |
Avbf_00493 | Avbf_04030 | A0A444TET2 | A0A444TQ01 | WD repeat-containing protein 34. | Dynein light chain. | 0.958 |
Avbf_00493 | Avbf_04561 | A0A444TET2 | A0A444T490 | WD repeat-containing protein 34. | Dynein light chain roadblock-type 2. | 0.985 |
Avbf_00493 | Avbf_09595 | A0A444TET2 | A0A444SI04 | WD repeat-containing protein 34. | Dynein light chain. | 0.947 |
Avbf_00493 | Avbf_10060 | A0A444TET2 | A0A444TQW1 | WD repeat-containing protein 34. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.953 |
Avbf_00493 | Avbf_12758 | A0A444TET2 | A0A444TA55 | WD repeat-containing protein 34. | Dynein light chain. | 0.958 |
Avbf_01795 | Avbf_00493 | A0A444TGE1 | A0A444TET2 | WD repeat-containing protein 60. | WD repeat-containing protein 34. | 0.994 |
Avbf_01795 | Avbf_03172 | A0A444TGE1 | A0A444TNC8 | WD repeat-containing protein 60. | Tctex1 domain-containing protein 2. | 0.971 |
Avbf_01795 | Avbf_03438 | A0A444TGE1 | A0A444TUJ2 | WD repeat-containing protein 60. | Dynein light chain Tctex-type 1. | 0.978 |
Avbf_01795 | Avbf_04030 | A0A444TGE1 | A0A444TQ01 | WD repeat-containing protein 60. | Dynein light chain. | 0.971 |
Avbf_01795 | Avbf_04561 | A0A444TGE1 | A0A444T490 | WD repeat-containing protein 60. | Dynein light chain roadblock-type 2. | 0.984 |
Avbf_01795 | Avbf_09595 | A0A444TGE1 | A0A444SI04 | WD repeat-containing protein 60. | Dynein light chain. | 0.947 |
Avbf_01795 | Avbf_10060 | A0A444TGE1 | A0A444TQW1 | WD repeat-containing protein 60. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.968 |
Avbf_01795 | Avbf_12758 | A0A444TGE1 | A0A444TA55 | WD repeat-containing protein 60. | Dynein light chain. | 0.971 |
Avbf_02169 | Avbf_03172 | A0A444T664 | A0A444TNC8 | Dynein intermediate chain 3, ciliary. | Tctex1 domain-containing protein 2. | 0.959 |
Avbf_02169 | Avbf_03438 | A0A444T664 | A0A444TUJ2 | Dynein intermediate chain 3, ciliary. | Dynein light chain Tctex-type 1. | 0.978 |
Avbf_02169 | Avbf_04030 | A0A444T664 | A0A444TQ01 | Dynein intermediate chain 3, ciliary. | Dynein light chain. | 0.947 |
Avbf_02169 | Avbf_04561 | A0A444T664 | A0A444T490 | Dynein intermediate chain 3, ciliary. | Dynein light chain roadblock-type 2. | 0.982 |
page 1 of 5