STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_00688Vinculin. (937 aa)    
Predicted Functional Partners:
Avbf_06202
Catenin alpha.
    
0.993
Avbf_01336
Alpha-actinin, sarcomeric.
   
 0.993
Avbf_10115
Talin-1.
   
 0.989
Avbf_03398
Talin-1.
   
 0.989
Avbf_05337
Sorbin and SH3 domain-containing protein 1.
   
 0.987
Avbf_01451
Armadillo segment polarity protein.
   
 0.963
Avbf_05900
PDZ and LIM domain protein Zasp.
   
 0.959
Avbf_00726
Uncharacterized protein.
   
 0.949
Avbf_01352
Enhancer of filamentation 1.
    
 0.944
Avbf_07965
Vinexin.
    
 0.942
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.