STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_03193Copine-8. (562 aa)    
Predicted Functional Partners:
Avbf_04400
Ribonuclease H2 subunit B.
   
 
 0.876
Avbf_09221
Ribonuclease H2 subunit A.
   
 
 0.855
Avbf_04554
Uncharacterized protein.
   
 
  0.659
Avbf_08689
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.658
Avbf_01336
Alpha-actinin, sarcomeric.
     
 0.648
Avbf_03006
Serine/threonine-protein kinase PAK mbt.
   
 
  0.621
Avbf_11365
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.618
Avbf_05005
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.618
Avbf_02162
Ras-related protein Rab-7a.
     
 0.611
Avbf_01776
Lamin Dm0; Belongs to the intermediate filament family.
     
 0.601
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.