STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Avbf_03050Tetraspanin-13. (91 aa)    
Predicted Functional Partners:
Avbf_03670
Twitchin.
    
 
 0.674
Avbf_03671
Disorganized muscle protein 1.
    
 
 0.674
Avbf_11326
Kalirin.
    
 
 0.671
Avbf_01845
CAVP-target protein.
    
 
 0.671
Avbf_03568
Contactin-5.
    
 
 0.671
Avbf_00465
Phosphatidylinositol 3-kinase regulatory subunit alpha.
    
  0.654
Avbf_14821
Lysosome-associated membrane glycoprotein 1.
    
 0.641
Avbf_13238
Band 3 anion transport protein.
    
 0.641
Avbf_04442
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform; Belongs to the PI3/PI4-kinase family.
    
 0.624
Avbf_00377
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
    
 0.624
Your Current Organism:
Armadillidium vulgare
NCBI taxonomy Id: 13347
Other names: A. vulgare, common pillbug
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.