STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (397 aa)    
Predicted Functional Partners:
pta
Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
ARC33654.1
Acylphosphatase; Catalyzes the hydrolysis of acylphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.913
ARC33335.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.656
lpdA-2
Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.642
pflB
Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.585
ARC33356.1
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.572
ARC33336.1
Competence protein ComG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.560
ARC33337.1
Competence protein ComGF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.560
ARC33338.1
Competence protein ComGE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.560
ARC33339.1
Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.560
Your Current Organism:
Streptococcus equinus
NCBI taxonomy Id: 1335
Other names: ATCC 33317 [[Streptococcus bovis]], ATCC 9812, CCUG 17828 [[Streptococcus bovis]], CCUG 27302, CCUG 34832 [[Streptococcus bovis]], CIP 102302 [[Streptococcus bovis]], CIP 102504, DSM 20480 [[Streptococcus bovis]], DSM 20558, IFO 12553, JCM 5802 [[Streptococcus bovis]], JCM 7879, LMG 14897, LMG 8518 [[Streptococcus bovis]], LMG:14897, LMG:8518 [[Streptococcus bovis]], NBRC 12553, NCDO 597 [[Streptococcus bovis]], NCIMB 700597 [[Streptococcus bovis]], NCTC 12969, NCTC 8177 [[Streptococcus bovis]], S. equinus, Streptococcus bovis
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