Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A6J79_09270 | ARC33676.1 | A6J79_09270 | A6J79_04315 | RDD family protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
A6J79_09270 | ARC33823.1 | A6J79_09270 | A6J79_05160 | RDD family protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
ARC33676.1 | A6J79_09270 | A6J79_04315 | A6J79_09270 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RDD family protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
ARC33676.1 | ARC33823.1 | A6J79_04315 | A6J79_05160 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
ARC33821.1 | ARC33823.1 | A6J79_05150 | A6J79_05160 | UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |
ARC33821.1 | alaS | A6J79_05150 | A6J79_05155 | UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.729 |
ARC33823.1 | A6J79_09270 | A6J79_05160 | A6J79_09270 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RDD family protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
ARC33823.1 | ARC33676.1 | A6J79_05160 | A6J79_04315 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
ARC33823.1 | ARC33821.1 | A6J79_05160 | A6J79_05150 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |
ARC33823.1 | ARC33824.1 | A6J79_05160 | A6J79_05165 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.485 |
ARC33823.1 | alaS | A6J79_05160 | A6J79_05155 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.456 |
ARC33824.1 | ARC33823.1 | A6J79_05165 | A6J79_05160 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.485 |
alaS | ARC33821.1 | A6J79_05155 | A6J79_05150 | alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.729 |
alaS | ARC33823.1 | A6J79_05155 | A6J79_05160 | alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.456 |