STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_0088Oxygenase protein. (634 aa)    
Predicted Functional Partners:
AKL17_3820
Catechol 2,3-dioxygenase; Extradiol ring-cleavage dioxygenase:Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I.
 
  
 0.926
AKL17_0080
Metapyrocatechase.
 
  
 0.878
AKL17_0078
Hypothetical protein.
  
  
 0.835
AKL17_2941
Glyoxalase/bleomycin resistance protein/dioxygenase.
    
 0.822
AKL17_0087
MarR family transcriptional regulator.
 
  
 0.798
AKL17_3353
Phosphonate ABC transporter periplasmic phosphonate-binding protein.
  
    0.489
AKL17_3706
Hydroxyacid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.487
idi
Isopentenyl-diphosphate delta-isomerase, type 1; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
   
  
 0.440
AKL17_3718
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.411
AKL17_0152
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.410
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.