STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_0387acyl-CoA dehydrogenase domain-containing protein. (556 aa)    
Predicted Functional Partners:
AKL17_3640
MaoC domain-containing protein.
 
 0.984
AKL17_0910
methylmalonyl-CoA mutase large subunit.
 
 
 0.972
AKL17_0912
crotonyl-CoA reductase.
 
 
 0.797
AKL17_4433
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.721
AKL17_1748
3-hydroxybutyryl-CoA epimerase.
  
 0.710
AKL17_3095
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase.
  
 0.710
AKL17_0399
Electron transfer flavoprotein, alpha subunit.
 
 0.687
AKL17_4419
Electron transfer flavoprotein, alpha subunit.
 
 0.667
AKL17_0396
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.662
AKL17_1262
AMP-dependent synthetase and ligase.
  
 0.630
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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