STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_0399Electron transfer flavoprotein, alpha subunit. (308 aa)    
Predicted Functional Partners:
AKL17_0152
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.999
AKL17_0400
Electron transfer flavoprotein subunit beta.
 0.999
AKL17_4418
Electron transfer flavoprotein, beta subunit.
 0.996
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
 
 
    0.897
AKL17_4451
acyl-CoA dehydrogenase-like.
 
 0.892
AKL17_2333
isovaleryl-CoA dehydrogenase.
 
 0.885
AKL17_4467
isovaleryl-CoA dehydrogenase.
 
 0.880
AKL17_1783
acyl-CoA dehydrogenase.
 
 0.876
AKL17_3092
acyl-CoA dehydrogenase.
 
 0.871
AKL17_2657
Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.862
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.