STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_0568Chitin deacetylase. (471 aa)    
Predicted Functional Partners:
AKL17_0569
Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 0.996
AKL17_0566
Ureidoglycolate hydrolase.
 
    0.955
AKL17_0570
Class I monoheme cytochrome c.
 
    0.945
AKL17_0567
Hypothetical protein.
 
     0.908
AKL17_2245
N-carbamoyl-L-amino acid hydrolase.
   
 0.841
AKL17_0642
Xanthine dehydrogenase molybdenum-binding subunit.
 
     0.826
AKL17_1144
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.816
AKL17_0643
Xanthine dehydrogenase, small subunit.
 
     0.811
AKL17_0641
Xanthine dehydrogenase accessory factor.
 
     0.711
AKL17_1987
Allantoate amidohydrolase.
   
 0.554
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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