STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_0628Transmembrane protein. (327 aa)    
Predicted Functional Partners:
AKL17_0629
Hypothetical protein.
      0.875
AKL17_0630
Hypothetical protein.
 
    
0.800
AKL17_4204
Hypothetical protein.
 
   
 0.732
AKL17_4672
Polysaccharide synthesis/modification protein.
 
     0.642
AKL17_1760
Glycosyl transferase.
 
  
 0.585
AKL17_0627
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.538
AKL17_0631
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
       0.504
AKL17_4596
Dolichol-phosphate mannosyltransferase.
 
  
 0.500
AKL17_0089
TonB-dependent receptor plug domain-containing protein.
  
     0.481
AKL17_4594
Hypothetical protein.
  
     0.466
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.