STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_0654Tripartite ATP-independent periplasmic transporter DctQ. (161 aa)    
Predicted Functional Partners:
AKL17_0655
DctM9.
 
 
 0.874
AKL17_0658
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
     0.821
AKL17_0653
TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.791
AKL17_0657
Hypothetical protein.
       0.774
AKL17_0656
Dihydroorotate dehydrogenase.
       0.773
AKL17_3298
TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.744
AKL17_0659
Cupin 2 domain-containing protein.
  
    0.742
AKL17_3281
TRAP dicarboxylate family transporter DctQ subunit.
  
     0.673
AKL17_3881
Tripartite ATP-independent periplasmic transporter DctQ.
  
     0.656
AKL17_3294
TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.618
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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