STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_0768Extracellular ligand-binding receptor. (388 aa)    
Predicted Functional Partners:
AKL17_1260
Putative amino acids binding protein.
  
  
 
0.915
AKL17_2930
Branched chain amino acid ABC transporter periplasmic substrate-binding protein.
   
 
 0.906
AKL17_1902
Branched-chain amino acid ABC transporter periplasmic branched-chain amino acid-binding protein LivK.
     
  0.900
AKL17_4161
ABC branched amino acid transporter family, periplasmic substrate-binding subunit.
     
  0.900
AKL17_4413
Putative branched-chain amino acid transport system substrate-binding protein.
     
  0.900
AKL17_4414
Branched-chain amino acid ABC transporter periplasmic branched-chain amino acid binding protein LivK.
     
  0.900
AKL17_1259
Branched-chain amino acid ABC superfamily ATP binding cassette transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.738
AKL17_4409
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.698
AKL17_4408
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.688
AKL17_1257
High-affinity branched-chain amino acid transport ATP-binding protein BRAF 5.
 
  
 0.687
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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