STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_1114NADH dehydrogenase. (188 aa)    
Predicted Functional Partners:
AKL17_2859
Potassium efflux system protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
 
 0.954
AKL17_1113
Hypothetical protein.
       0.781
AKL17_1115
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
    0.695
AKL17_3741
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
 
 0.514
AKL17_1244
Aspartate aminotransferase.
  
    0.413
AKL17_1435
Hypothetical protein.
  
    0.413
AKL17_1843
Aminotransferase.
  
    0.413
AKL17_1923
Aspartate aminotransferase.
  
    0.413
AKL17_3605
Aspartate aminotransferase B protein.
  
    0.413
AKL17_4654
Aminotransferase, class I and II.
  
    0.413
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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