STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_1150Selenophosphate synthetase-related protein. (327 aa)    
Predicted Functional Partners:
AKL17_1149
Histone acetyltransferase HPA2.
     0.981
AKL17_1147
Nitrilase.
 
   
 0.958
AKL17_1151
Hypothetical protein.
 
   
 0.957
AKL17_1148
Radical SAM protein.
 
     0.956
AKL17_1152
Flavoprotein involved in K transport.
 
   
 0.954
AKL17_1146
Hypothetical protein.
 
   
 0.922
AKL17_1153
Hypothetical protein.
       0.803
AKL17_1145
Transcriptional regulator GntR family.
 
     0.790
AKL17_2986
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.413
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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