Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKL17_1460 | AKL17_1462 | AKL17_1460 | AKL17_1462 | Glutamine synthetase-5. | Glutamine synthetase-4. | 0.927 |
AKL17_1460 | AKL17_1548 | AKL17_1460 | AKL17_1548 | Glutamine synthetase-5. | Nitrogenase molybdenum-iron protein subunit alpha. | 0.917 |
AKL17_1460 | AKL17_1549 | AKL17_1460 | AKL17_1549 | Glutamine synthetase-5. | Nitrogenase molybdenum-iron protein subunit beta; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. | 0.940 |
AKL17_1460 | AKL17_3022 | AKL17_1460 | AKL17_3022 | Glutamine synthetase-5. | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.937 |
AKL17_1460 | AKL17_4286 | AKL17_1460 | AKL17_4286 | Glutamine synthetase-5. | Glutamate synthase subunit alpha. | 0.972 |
AKL17_1460 | AKL17_4289 | AKL17_1460 | AKL17_4289 | Glutamine synthetase-5. | Putative oxidoreductase. | 0.923 |
AKL17_1460 | carA | AKL17_1460 | AKL17_2689 | Glutamine synthetase-5. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.915 |
AKL17_1460 | carB | AKL17_1460 | AKL17_1154 | Glutamine synthetase-5. | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | 0.913 |
AKL17_1460 | glmS | AKL17_1460 | AKL17_2337 | Glutamine synthetase-5. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.921 |
AKL17_1460 | nifH | AKL17_1460 | AKL17_1547 | Glutamine synthetase-5. | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. | 0.913 |
AKL17_1462 | AKL17_1460 | AKL17_1462 | AKL17_1460 | Glutamine synthetase-4. | Glutamine synthetase-5. | 0.927 |
AKL17_1462 | AKL17_1548 | AKL17_1462 | AKL17_1548 | Glutamine synthetase-4. | Nitrogenase molybdenum-iron protein subunit alpha. | 0.917 |
AKL17_1462 | AKL17_1549 | AKL17_1462 | AKL17_1549 | Glutamine synthetase-4. | Nitrogenase molybdenum-iron protein subunit beta; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. | 0.940 |
AKL17_1462 | AKL17_3022 | AKL17_1462 | AKL17_3022 | Glutamine synthetase-4. | Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.937 |
AKL17_1462 | AKL17_4286 | AKL17_1462 | AKL17_4286 | Glutamine synthetase-4. | Glutamate synthase subunit alpha. | 0.972 |
AKL17_1462 | AKL17_4289 | AKL17_1462 | AKL17_4289 | Glutamine synthetase-4. | Putative oxidoreductase. | 0.923 |
AKL17_1462 | carA | AKL17_1462 | AKL17_2689 | Glutamine synthetase-4. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.915 |
AKL17_1462 | carB | AKL17_1462 | AKL17_1154 | Glutamine synthetase-4. | Carbamoyl phosphate synthase large subunit; Belongs to the CarB family. | 0.913 |
AKL17_1462 | glmS | AKL17_1462 | AKL17_2337 | Glutamine synthetase-4. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.933 |
AKL17_1462 | nifH | AKL17_1462 | AKL17_1547 | Glutamine synthetase-4. | Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. | 0.913 |
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