STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_1482Hydrogenase maturation protease HupD. (207 aa)    
Predicted Functional Partners:
AKL17_1473
Hydrogenase, cytochrome b subunit.
  
 0.993
AKL17_1484
Hydrogenase expression/formation protein HupG; Belongs to the HupG/HyaE family.
 
  
 0.986
AKL17_1485
HupH hydrogenase expression/formation protein.
 
  
 0.985
AKL17_1483
Hydrogenase maturation chaperone HupF.
 
  
 0.976
AKL17_1486
Hypothetical protein.
 
  
 0.975
hypA
Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.971
AKL17_1480
Uptake hydrogenase small subunit.
 
  
 0.949
AKL17_1490
NI2 -binding GTPase protein HypB.
 
  
 0.938
AKL17_1475
Hydrogenase protein large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.932
AKL17_1479
Hydrogenase large subunit.
 
 
 0.932
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.