STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_1483Hydrogenase maturation chaperone HupF. (106 aa)    
Predicted Functional Partners:
AKL17_1484
Hydrogenase expression/formation protein HupG; Belongs to the HupG/HyaE family.
  
 0.990
AKL17_1485
HupH hydrogenase expression/formation protein.
 
  
 0.977
AKL17_1486
Hypothetical protein.
 
  
 0.977
AKL17_1482
Hydrogenase maturation protease HupD.
 
  
 0.976
AKL17_1493
Hydrogenase isoenzyme formation protein HypD; Belongs to the HypD family.
  
 
 0.976
AKL17_1494
Hydrogenase expression/formation protein HypE.
  
 
 0.969
hypA
Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.958
AKL17_1491
Hydrogenase transcriptional regulator HupR.
 
   0.948
AKL17_1490
NI2 -binding GTPase protein HypB.
 
  
 0.939
AKL17_1480
Uptake hydrogenase small subunit.
 
 
 0.923
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.