STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_1543Ferredoxin I. (66 aa)    
Predicted Functional Partners:
AKL17_1542
Ferredoxin.
 
  
 0.896
AKL17_1545
Nitrogen fixation protein RnfF; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
   
 0.839
AKL17_1570
Nitrogen fixation protein.
 
    0.829
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
    0.817
AKL17_1554
Hypothetical protein.
 
    0.814
AKL17_1544
sigma-E factor regulatory protein RseC.
     
 0.811
AKL17_1546
Ferredoxin V.
 
  
 0.805
AKL17_1557
Ferredoxin III.
 
    0.790
AKL17_1553
Nitrogen fixation protein NifX.
 
    0.787
AKL17_1558
NifQ family protein.
 
    0.760
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.