STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_1597Putative sensor histidine kinase. (461 aa)    
Predicted Functional Partners:
AKL17_1598
Phosphate/phosphonate ABC transporter.
   
 0.969
AKL17_1596
Two component sigma54 specific Fis family transcriptional regulator.
 
 
 0.931
AKL17_2657
Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.914
AKL17_1594
Arsenite oxidase, large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 
 0.898
AKL17_1595
Arsenite oxidase, small subunit.
 
 
 0.884
AKL17_1269
Two-component hybrid sensor and regulator.
  
 
 0.617
AKL17_1599
Hypothetical protein.
  
 
 0.578
AKL17_1601
Regulatory protein, ArsR.
 
   
 0.523
AKL17_1600
Permease.
       0.445
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.426
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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