STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_1785LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
AKL17_2415
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.715
AKL17_4713
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.707
AKL17_1305
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.649
AKL17_1633
YagP; Belongs to the LysR transcriptional regulatory family.
  
     0.647
AKL17_0980
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.645
AKL17_4688
AHCY transcriptional activator HvrB; Belongs to the LysR transcriptional regulatory family.
  
     0.642
AKL17_3851
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.623
AKL17_2957
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.608
AKL17_1121
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.600
AKL17_2098
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.597
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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