STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL17_2026Choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family. (545 aa)    
Predicted Functional Partners:
AKL17_2025
Aminotransferase, class V.
       0.539
AKL17_1976
Na /solute symporter.
  
  
 0.468
AKL17_2037
MerR family transcriptional regulator.
   
  
 0.436
AKL17_4286
Glutamate synthase subunit alpha.
      
 0.418
AKL17_2819
ABC glycine betaine/L-proline transporter, periplasmic substrate-binding subunit.
 
   
 0.415
AKL17_3587
Amino acid carrier protein.
 
   
 0.412
betI
Transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
  
  
 0.407
AKL17_2821
Glycine betaine/L-proline ABC transporter ATP-binding protein ProV.
 
   
 0.404
Your Current Organism:
Defluviimonas alba
NCBI taxonomy Id: 1335048
Other names: CGMCC 1.12518, D. alba, Defluviimonas alba Pan et al. 2015, LMG 27406, LMG:27406, Rhodobacter sp. b45, Rhodobacter sp. cai42, strain cai42
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